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ŠÍMOVÁ, P. – ŠÁLEK, M. – BEJČEK, V. – ŠŤASTNÝ, K. – ANDĚRA, M. – HANEL, L. – LUSK, S. – MORAVEC, J. – ZIMA, J. Species richness of vertebrates in the Czech Republic. Folia Zoologica, 2008, roč. 4, č. 57, s. 452 - 464. ISSN: 0139-7893.
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ŠÍMOVÁ, P. – ČERNÝ, M. – CIENCIALA, E. – APLTAUER, J. – KUČEROVÁ, J. – BERANOVÁ, J. A methodology for classifying aerial photographs within the CzechTerra landscape inventory system: a new approach to generating data for landscape analyses. Journal of Landscape Studies - online version, 2009, roč. 2, č. 2, s. 43 - 55. ISSN: 1802-4416.
BARTÁK, V. How to extract river networks and catchment boundaries from DEM: a review of digital terrain analysis techniques. Journal of Landscape Studies - online version, 2009, roč. 2, č. 2, s. 57 - 68. ISSN: 1802-4416.
KLÁPŠŤOVÁ, E. – KLÁPŠTĚ, P. Public participation in response to some problems of regional planning in the Czech Republic. Journal of Landscape Studies - online version, 2010, roč. 3, č. 2-3, s. 105 - 113. ISSN: 1802-4416.
ŠPATENKOVÁ, O. – STEIN, A. Identifying factors of influence in the spatial distribution of domestic fires. International Journal of Geographical Information Science, 2010, roč. 24, č. 6, s. 841 - 858. ISSN: 1365-8816.
PETRIK, P. – PERGL, J. – WILD, J. – WILD, J. Recording effort biases the species richness cited in plant distribution atlases. Perspectives in Plant Ecology, Evolution and Systematics, 2010, roč. 12, č. 1, s. 57 - 65. ISSN: 1433-8319.
NOVÁK, Z. Zhodnocení zbožových proudů vodní dopravy na dolním Labi v rámci transevropské dopravní sítě. Doprava, 2010, roč. 2010, č 5, s. 17-18. ISSN: 0012-5520.
TREML, V. – WILD, J. – CHUMAN, T. – POTŮČKOVÁ, M. Assessing the change in cover of non-indigenous dwarf-pine using aerial photographs, a case study from The Hrubý Jeseník Mts., The Sudetes. Journal of Landscape Ecology, 2011, roč. 4, č. 2, s. 90-104. ISSN: 1803-2427.
WILD, J. – HOLEC, J. Fungal diversity in sandstone gorges of the Bohemian Switzerland National Park (Czech Republic): impact of climatic inversion. Czech Mycology, 2011, roč. 63, č. 2, s. 243-263. ISSN: 1211-0981.
CHYTRÝ, M. – WILD, J. – PYŠEK, P. – JAROŠÍK, V. – DENDONCKER, N. – REGINSTER, I. – PINO, J. – MASKELL, L. – VILA, M. – PERGL, J. – KÜHN, I. – SPANGENBERG, J. – SETTELE, J. Projecting trends in plant invasions in Europe under different scenarios of future land-use change. GLOBAL ECOLOGY AND BIOGEOGRAPHY, 2012, roč. 2012, č. 21, s. 75-87. ISSN: 1466-822X.
ŠÍMOVÁ, P. – GDULOVÁ, K. Landscape indices behavior: A review of scale effects . Applied Geography, 2012, roč. 2012, č. 34, s. 385-394. ISSN: 0143-6228.
MOUDRÝ, V. – ŠÍMOVÁ, P. Influence of positional accuracy, sample size and scale on modelling species distributions: a review. ..., 2012, roč. 26, č. 11, s. 2083-2095.
KLÁPŠTĚ, P. – BEČKA, M. – KLÁPŠŤOVÁ, E. Jak uvažovat o budoucnosti suburbií?. Urbanizmus a územní rozvoj, 2012, roč. 2012, č. 5, s. 49-54. ISSN: 1212-0855.
MOUDRÝ, V. – ŠÍMOVÁ, P. The Eects of False Positive Errors in Species Occurrence Data on the Performance of Species Distribution Models: Case Study on the Wild Duck (Anas platyrhynchos). Littera Scripta, 2012, roč. 5, č. 2, s. 243-249. ISSN: 1802-503X.
STRAKOVÁ, H. Thermal activity of municipal waste landfills - methods and results: a case study in the Central Bohemia. ..., 2013, roč. 2013, č. 2, s. 95-103. ISSN: N.
BARTÁK, V. – VOREL, A. – ŠÍMOVÁ, P. – PUŠ, V. Spatial spread of Eurasian beavers in river networks: a comparison of range expansion rates. JOURNAL OF ANIMAL ECOLOGY, 2013, roč. 82, č. 3, s. 587-597. ISSN: 0021-8790.
MOUDRÝ, V. – ŠÍMOVÁ, P. Relative importance of climate, topography, and habitats for breeding wetland birds with different latitudinal distributions in the Czech Republic. Applied Geography, 2013, roč. 2013, č. 44, s. 165-171. ISSN: 0143-6228.
MÜNZBERGOVÁ, Z. – HADINCOVÁ, V. – WILD, J. – KINDLMANNOVÁ, J. Variability in the Contribution of Different Life Stages to Population Growth as a Key Factor in the Invasion Success of Pinus strobus. PLoS One, 2013, roč. 8, č. 2, s. 1-12. ISSN: 1932-6203.
ŠPATENKOVÁ, O. – VIRRANTAUS, K. Discovering spatio-temporal relationships in the distribution of building fires. FIRE SAFETY JOURNAL, 2013, roč. 62, č. SI, s. 49-63. ISSN: 0379-7112.
DVOŘÁK, S. – BARTÁK, V. – MACHÁČEK, Z. – MATĚJŮ, J. Home range size and spatio-temporal dynamics of male sika deer (Cervus nippon; Cervidae, Artiodactyla) in an introduced population. Folia Zoologica, 2014, roč. 63, č. 2, s. 103-115. ISSN: 0139-7893.
BARTÁK, V. – GDULOVÁ, K. – ŠPATENKOVÁ, O. – BÁRTA, A. – ŠÍMOVÁ, P. Modelling the probability of building fires. Geoinformatics FCE CTU. , 2014, roč. 2014, č. 13, s. 37-48. ISSN: 1802-2669 .
ŠTURSA, J. – WILD, J. Kleč a smilka – klíčoví hráči vývoje alpínského bezlesí Krkonoš (Vysoké Sudety, Česká republika). Opera Corcontica, 2014, roč. 2014, č. 51, s. 5-36. ISSN: 0139-925X.
ŠMEJDA, L. – HLOŽEK, J. – MENŠÍK, P. – METLIČKA, M. Archeologický výzkum opevnění lokality Hradiště u Plzně v letech 2012 a 2013. Archeologie západních Čech, 2015, roč. 2015, č. 9, s. 25-43. ISSN: 1804-2953.
ŠMEJDA, L. Konference Archeologie opevnění. Archeologie západních Čech, 2015, roč. 2015, č. 9, s. 5-12. ISSN: 1804-2953.
ŠMEJDA, L. Computer Applications and Quantitative Methods in Archaeology: National Chapter Czech Republic/Slovakia. Interdisciplinaria Archaeologica – Natural Sciences in Archaeology (IANSA), 2015, roč. 6, č. 2, s. 177-183. ISSN: 1804-848X.
ČIPEROVÁ, M. – PAVELKA, J. – ŠMEJDA, L. Detekce stop mléka v porézní keramice z neolitu jihozápadních Čech a otázka trávení laktózy u evropských populací v minulosti. Acta Filozofické fakulty Západočeské univerzity v Plzni. , 2015, roč. 7, č. 2, s. 193-211. ISSN: 1802-0364 .
STRAKOVÁ, H. – ŠEDINA, J. – BÍLÁ, Z. Monitoring of heaps using various technologies. Stavební obzor, 2015, roč. 11, č. 2, s. 1-15. ISSN: 1805-2576.
MORELLI, F. – JIGUET, F. – REIF, J. – PLEXIDA, S. – VALLI, A. – INDYKIEWICZ, P. – ŠÍMOVÁ, P. – TICHIT, M. – MORETTI, M. – TRYJANOWSKI, P. Cuckoo and biodiversity: testing the correlation between species occurrence and bird species richness in Europe. Biological Conservation, 2015, roč. 2015, č. 190, s. 123-132. ISSN: 0006-3207.
FISCHER, A. – FISCHER, H. – KOPECKÝ, M. – MACEK, M. – WILD, J. Small changes in species composition despite stand-replacing bark beetle outbreak in Picea abies mountain forests. Canadian Journal of Forest Research-Revue Canadienne de Recherche Forestiere, 2015, roč. 2015, č. 45, s. 1164-1171. ISSN: 0045-5067.
ŠÍMOVÁ, P. – ŠŤASTNÝ, K. – ŠÁLEK, M. Refugial role of urbanized areas and colonization potential for declining Crested Lark (Galerida cristata) populations in the Czech Republic, Central Europe. Journal of Ornithology, 2015, roč. 156, č. 4, s. 915-921. ISSN: 0021-8375.
KLOUČEK, T. – LAGNER, O. – ŠÍMOVÁ, P. How does data accuracy influence the reliability of digital viewshed models? A case study with wind turbines. Applied Geography, 2015, roč. 2015, č. 64, s. 46-54. ISSN: 0143-6228.
MOUDRÝ, V. Modelling species distributions with simulated virtual species. Journal of Biogeography, 2015, roč. 42, č. 8, s. 1365-1366. ISSN: 0305-0270.
PAVELKA, J. – ŠMEJDA, L. – HYNEK, R. – HRDLIČKOVÁ KUČKOVÁ, Š. Immunological detection of denatured proteins as a method for rapid identification of food residues on archaeological pottery. JOURNAL OF ARCHAEOLOGICAL SCIENCE, 2016, roč. 2016, č. 73, s. 25-35. ISSN: 0305-4403.
FOGL, M. – MOUDRÝ, V. Influence of vegetation canopies on solar potential in urban environments. Applied Geography, 2016, roč. 2016, č. 66, s. 73-80. ISSN: 0143-6228.
HAIS, M. – WILD, J. – BEREC, L. – BRŮNA, J. – KENNEDY, R. – BRAATEN, J. – BROŽ, Z. Landsat Imagery Spectral Trajectories - Important Variables for Spatially Predicting the Risks of Bark Beetle Disturbance. Remote Sensing, 2016, roč. 8, č. 8, s. 1-22. ISSN: 2072-4292.
ADÁMEK, M. – HADINCOVÁ, V. – WILD, J. Long-term effect of wildfires on temperate Pinus sylvestris forests: Vegetation dynamics and ecosystem resilience. Forest Ecology and Management, 2016, roč. 380, č. 15 November 2016, s. 285-295. ISSN: 0378-1127.
**BAUMANOVA, M. – ŠMEJDA, L. Structural dynamics of spatial complexity at the ‘Palace of Gede’, Kenya. Azania, 2017, roč. 52, č. 1, s. 71-99. ISSN: 0067-270X.
ŠMEJDA, L. – HEJCMAN, M. – HORÁK, J. – **SHAI, I. Ancient settlement activities as important sources of nutrients (P, K, S, Zn and Cu) in Eastern Mediterranean ecosystems – The case of biblical Tel Burna, Israel. Catena, 2017, roč. 2017, č. 156, s. 62-73. ISSN: 0341-8162.
ŠMEJDA, L. Interpretive and Analytical Approaches to Aerial Survey in Archaeology. Interdisciplinaria Archaeologica – Natural Sciences in Archaeology (IANSA), 2017, roč. 8, č. 1, s. 79-92. ISSN: 1804-848X.
**ORENDI, A. – ŠMEJDA, L. – **MCKINNY, C. – **DEBORAH, C. – **SHARP, C. – **SHAI, I. The agricultural landscape of Tel Burna: Ecology and economy of a bronze age/iron age settlement in the southern Levant. Journal of Landscape Ecology, 2017, roč. 10, č. 3, s. 165-188. ISSN: 1805-4196.
**PANKOWSKÁ, A. – ŠMEJDA, L. – **TAJER, A. – **RIEGER, D. Využití kontextuální tafonomie k rekonstrukci způsobu exkarnace sekundárně uložených lidských kostí. Archeologicke Rozhledy, 2017, roč. 69, č. 3, s. 399-420. ISSN: 0323-1267.
MORELLI, F. – **MOLLER, A. – **NELSON, E. – **BENEDETTI, Y. – -- Autor nenalezen UIC (522363) – **TICHIT, M. – ŠÍMOVÁ, P. – **JERZAK, L. – **MORETTI, M. – **TRYJANOWSKI, P. Cuckoo as indicator of high functional diversity of bird communities: A new paradigm for biodiversity surrogacy. ECOLOGICAL INDICATORS, 2017, roč. 2017, č. 72, s. 565-573. ISSN: 1470-160X.
MOUDRÝ, V. – KOMÁREK, J. – ŠÍMOVÁ, P. Which breeding bird categories should we use in models of species distribution?. ECOLOGICAL INDICATORS, 2017, roč. 2017, č. 74, s. 526-529. ISSN: 1470-160X.
MORELLI, F. – **ANDERS PAPE, M. – **NELSON, E. – BENEDETTI, Y. – **LIANG, W. – ŠÍMOVÁ, P. – **MORETTI, M. – **TRYJANOWSKI, P. The common cuckoo is an effective indicator of high bird species richness in Asia and Europe. Scientific Reports, 2017, roč. 2017, č. 7, s. 1-8. ISSN: 2045-2322.
MORELLI, F. – BENEDETTI, Y. – **SU, T. – **ZHOU, B. – MORAVEC, D. – ŠÍMOVÁ, P. – **LIANG, W. Taxonomic diversity, functional diversity and evolutionary uniqueness in bird communities of Beijing's urban parks: Effects of land use and vegetation structure . Urban Forestry & Urban Greening, 2017, roč. 2017, č. 23, s. 84-92. ISSN: 1618-8667.
**LEROUX, S. – **VANDER WAL, E. – **WIERSMA, Y. – **CHARRON, L. – **EBEL, J. – **ELLIS, N. – **HART, C. – **KISSLER, E. – **SAUNDERS, P. – ŠMEJDOVÁ, L. – **TANNER, A. – **YALCIN, S. Stoichiometric distribution models: ecological stoichiometry at the landscape extent. Ecology Letters, 2017, roč. 2017, č. 20, s. 1495-1506. ISSN: 1461-023X.
**SKÁLOVÁ, H. – **GUO, W. – WILD, J. – **PYŠEK, P. Ambrosia artemisiifolia in the Czech Republic: history of invasion, current distribution and prediction of future spread. Preslia, 2017, roč. 89, č. 1, s. 1-16. ISSN: 0032-7786.
HORÁK, J. – JANOVSKÝ, M. – HEJCMAN, M. – ŠMEJDA, L. – **KLÍR, T. Soil geochemistry of medieval arable fields in Lovětín near Třešť, Czech Republic. Catena, 2018, roč. neuvedeno, č. 162, s. 14-22. ISSN: 0341-8162.
ŠMEJDA, L. – HEJCMAN, M. – HORÁK, J. – **SHAI, I. Multi-element mapping of anthropogenically modified soils and sediments at the Bronze to Iron Ages site of Tel Burna in the southern Levant. QUATERNARY INTERNATIONAL, 2018, roč. 483, č. , s. 111-123. ISSN: 1040-6182.
ŠMEJDOVÁ, L. – ZASADIL, P. – MOUDRÝ, V. – ŠÁLEK, M. What makes new housing development unsuitable for house sparrows (Passer domesticus)?. Landscape and Urban Planning, 2018, roč. 2018, č. 169, s. 124-130. ISSN: 0169-2046.
MORAVEC, D. – BARTÁK, V. – PUŠ, V. – WILD, J. Wind turbine impact on near-ground air temperature. RENEWABLE ENERGY, 2018, roč. 123, č. August 2018, s. 627-633. ISSN: 0960-1481.
FOREJT, M. – DOLEJŠ, M. – **RAŠKA, P. How reliable is my historical land-use reconstruction? Assessing uncertainties in old cadastral maps. ECOLOGICAL INDICATORS, 2018, roč. 94, č. November, s. 237-245. ISSN: 1470-160X.
KOMÁREK, J. – KLOUČEK, T. – PROŠEK, J. The potential of Unmanned Aerial Systems: A tool towards precision classification of hard-to-distinguish vegetation types?. International Journal of Applied Earth Observation and Geoinformation, 2018, roč. 71, č. , s. 9-19. ISSN: 0303-2434.
LAGNER, O. – KLOUČEK, T. – ŠÍMOVÁ, P. Impact of input data (in)accuracy on overestimation of visible area in digital viewshed models. PeerJ, 2018, roč. 6, č. , s. 1-14. ISSN: 2167-8359.
KLOUČEK, T. – MORAVEC, D. – KOMÁREK, J. – LAGNER, O. – **ŠTYCH, P. Selecting appropriate variables for detecting grassland to cropland changes using high resolution satellite data. PeerJ, 2018, roč. , č. 6, s. 1-20. ISSN: 2167-8359.
MALAVASI, M. – **CARRANZA, M. – MORAVEC, D. – **CUTINI, M. Reforestation dynamics after land abandonment: a trajectory analysis in Mediterranean mountain landscapes. Regional Environmental Change, 2018, roč. 18, č. 8, s. 2459-2469. ISSN: 1436-3798.
MORELLI, F. – BENEDETTI, Y. – ŠÍMOVÁ, P. Landscape metrics as indicators of avian diversity and community measures. ECOLOGICAL INDICATORS, 2018, roč. 90, č. neuvedeno, s. 132-141. ISSN: 1470-160X.
MALAVASI, M. – BARTÁK, V. – **CARRANZA, M. – ŠÍMOVÁ, P. – **ACOSTA, A. Landscape pattern and plant biodiversity in Mediterranean coastal dune ecosystems: Do habitat loss and fragmentation really matter?. Journal of Biogeography, 2018, roč. 45, č. 6, s. 1367-1377. ISSN: 0305-0270.
**BAUMANOVA, M. – ŠMEJDA, L. Space as Material Culture: Residential Stone Buildings on the Precolonial Swahili Coast in a Comparative Perspective. South African Archaeological Bulletin, 2018, roč. 73, č. , s. 82-92. ISSN: 0038-1969.
**BAZZICHETTO, M. – MALAVASI, M. – BARTÁK, V. – **ACOSTA, A. – MOUDRÝ, V. – **CARRANZA, M. Modeling plant invasion on Mediterranean coastal landscapes: An integrative approach using remotely sensed data. Landscape and Urban Planning, 2018, roč. 2018, č. 171, s. 98-106. ISSN: 0169-2046.
**BAZZICHETTO, M. – MALAVASI, M. – BARTÁK, V. – **ACOSTA, A. – **ROCCHINI, D. – **CARRANZA, M. Plant invasion risk: A quest for invasive species distribution modelling in managing protected areas. ECOLOGICAL INDICATORS, 2018, roč. 95, č. 1, s. 311-319. ISSN: 1470-160X.
MOUDRÝ, V. – **LECOURS, V. – GDULOVÁ, K. – GÁBOR, L. – ŠMEJDOVÁ, L. – KROPÁČEK, J. – WILD, J. On the use of global DEMs in ecological modelling and the accuracy of new bare earth DEMs. ECOLOGICAL MODELLING, 2018, roč. 2018, č. 383, s. 3-9. ISSN: 0304-3800.
**LEPŠOVÁ-SKÁCELOVÁ, O. – **FIBICH, P. – WILD, J. – **LEPŠ, J. Trophic gradient is the main determinant of species and large taxonomic groups representation in phytoplankton of standing water bodies. ECOLOGICAL INDICATORS, 2018, roč. 85, č. , s. 262-270. ISSN: 1470-160X.
**ADÁMEK, M. – JANKOVSKÁ, Z. – **HADINCOVÁ, V. – **KULA, E. – WILD, J. Drivers of forest fire occurrence in the cultural landscape of Central Europe. Landscape Ecology, 2018, roč. 33, č. 11, s. 2031-2045. ISSN: 0921-2973.
DOLEJŠ, M. – **NÁDVORNÍK, J. – **RAŠKA, P. – **RIEZNER, J. Frozen Histories or Narratives of Change? Contextualizing Land-Use Dynamics for Conservation of Historical Rural Landscapes. Environmental Management, 2019, roč. 63, č. 3, s. 352-365. ISSN: 0364-152X.
MOUDRÝ, V. – GDULOVÁ, K. – FOGL, M. – KLÁPŠTĚ, P. – **URBAN, R. – KOMÁREK, J. – ŠMEJDOVÁ, L. – **ŠTRONER, M. – BARTÁK, V. – SOLSKÝ, M. Comparison of leaf-off and leaf-on combined UAV imagery and airborne LiDAR for assessment of a post-mining site terrain and vegetation structure: Prospects for monitoring hazards and restoration success. Applied Geography, 2019, roč. 104, č. March 2019, s. 32-41. ISSN: 0143-6228.
PROŠEK, J. – ŠÍMOVÁ, P. UAV for mapping shrubland vegetation: Does fusion of spectral and vertical information derived from a single sensor increase the classification accuracy?. International Journal of Applied Earth Observation and Geoinformation, 2019, roč. 75, č. 75, s. 151-162. ISSN: 0303-2434.
MORELLI, F. – BENEDETTI, Y. – MORAVEC, D. – **JERZAK, L. – **TRYJANOWSKI, P. – **LIANG, W. – **MOLLER, A. Global congruence between cuckoo species richness and biodiversity hotspots. Biological Conservation, 2019, roč. 232, č. , s. 28-34. ISSN: 0006-3207.
**SPERANDII, M. – **BAZZICHETTO, M. – **ACOSTA, A. – BARTÁK, V. – MALAVASI, M. Multiple drivers of plant diversity in coastal dunes: A Mediterranean experience. Science of the Total Environment, 2019, roč. 652, č. 20 February 2019, s. 1435-1444. ISSN: 0048-9697.
MALAVASI, M. – BARTÁK, V. – **JUCKER, T. – **ACOSTA, A. – **CARRANZA, M. – **BAZZICHETTO, M. Strength in Numbers: Combining Multi-Source Remotely Sensed Data to Model Plant Invasions in Coastal Dune Ecosystems. Remote Sensing, 2019, roč. 11, č. 275, s. 0-0. ISSN: 2072-4292.
MOUDRÝ, V. – BEKOVÁ, A. – LAGNER, O. Evaluation of a high resolution UAV imagery model for rooftop solar irradiation estimates. Remote Sensing Letters, 2019, roč. 10, č. 11, s. 1077-1085. ISSN: 2150-704X.
SVOBODOVÁ, K. – MONTEIRO, L. – VOJAR, J. – GDULOVÁ, K. Can trail characteristics influence visitor numbers in natural protected areas? A quantitative approach to trail choice assessment. Environmental & Socio-Economic Studies, 2019, roč. 7, č. 2, s. 10-20. ISSN: 2354-0079.
**BAUMANOVA, M. – ŠMEJDA, L. – **RÜTHER, H. Pre-Colonial Origins of Urban Spaces in the West African Sahel: Street Networks, Trade, and Spatial Plurality. JOURNAL OF URBAN HISTORY, 2019, roč. 45, č. 3, s. 500-516. ISSN: 0096-1442.
ROCCHINI, D. – **MARCANTONIO, M. – **DA RE, D. – **CHIRICI, G. – **GALLUZZI, M. – **LENOIR, J. – **RICOTTA, C. – **TORRESANI, M. – **ZIV, G. Time-lapsing biodiversity: An open source method for measuring diversity changes by remote sensing . Remote Sensing of Environment, 2019, roč. 2019, č. 231, s. 1-7. ISSN: 0034-4257.
**GOBBI, S. – **CIOLLI, M. – **LA PORTA, N. – **TATTONI, C. – ROCCHINI, D. – **ZATELLI, P. New Tools for the Classification and Filtering of Historical Maps . ISPRS INTERNATIONAL JOURNAL OF GEO-INFORMATION, 2019, roč. 8, č. 10, s. 0-0. ISSN: 2220-9964.
ROCCHINI, D. – **MARCANTONIO, M. – **ARHONDITSIS, G. – **LO CACCIATO, A. – **HAUFFE, H. – **HE, K. Cartogramming uncertainty in species distribution models: A Bayesian approach. Ecological Complexity, 2019, roč. 2019, č. 38, s. 146-155. ISSN: 1476-945X.
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**TORRESANI, M. – ROCCHINI, D. – **SONNENSCHEIN, R. – **ZEBISCH, M. – **MARCANTONIO, M. – **RICOTTA, C. – **TONON, G. Estimating tree species diversity from space in an alpine conifer forest: The Rao's Q diversity index meets the spectral variation hypothesis . Ecological Informatics, 2019, roč. 2019, č. 52, s. 26-34. ISSN: 1574-9541.
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